pm_distGeom::setGeomLogPMF Interface Reference

Return the natural logarithm of the Probability Mass Function (PMF) of the Geometric distribution for an input stepSuccess within the discrete integer support of the distribution \([0, +\infty)\). More...

Detailed Description

Return the natural logarithm of the Probability Mass Function (PMF) of the Geometric distribution for an input stepSuccess within the discrete integer support of the distribution \([0, +\infty)\).

Parameters

[out]	logPMF	: The output scalar (or array of the same rank, shape, and size as other array-like arguments), of the same type and kind as logProbSuccess, containing the natural logarithm of the PMF of the distribution at the specified stepSuccess.
[in]	stepSuccess	: The input positive scalar (or array of the same rank, shape, and size as other array-like arguments), of type integer of default kind IK, containing the values at which the PMF must be computed. Note that stepSuccess represents the Bernoulli trial step at which the first success occurs.
[in]	logProbSuccess	: The input scalar (or array of the same rank, shape, and size as other array-like arguments), of type real of kind any supported by the processor (e.g., RK, RK32, RK64, or RK128), containing the natural logarithm of the probability of success at each Bernoulli step.
[in]	logProbFailure	: The input scalar (or array of the same rank, shape, and size as other array-like arguments), of the same type and kind as logProbSuccess containing the natural logarithm of the probability of failure at each Bernoulli step. (optional, default = log(get1mexp(logProbSuccess)))

Possible calling interfaces ⛓

use pm_distGeom, only: setGeomLogPMF
 
call setGeomLogPMF(logPMF, stepSuccess, logProbSuccess)
call setGeomLogPMF(logPMF, stepSuccess, logProbSuccess, logProbFailure)

Warning

The condition 0 < stepSuccess must hold for the corresponding input arguments.
The condition logProbSuccess <= 0. must hold for the corresponding input arguments.
The condition logProbFailure < 0. must hold for the corresponding input arguments.
The condition exp(logProbFailure) + exp(logProbSuccess) == 1. must hold for the corresponding input arguments.
These conditions are verified only if the library is built with the preprocessor macro CHECK_ENABLED=1.

The pure procedure(s) documented herein become impure when the ParaMonte library is compiled with preprocessor macro CHECK_ENABLED=1.
By default, these procedures are pure in release build and impure in debug and testing builds.

Remarks

The procedures under discussion are elemental.

See also

getGeomLogPMF

Example usage ⛓

program example
 
    use pm_kind, only: SK, IK, LK
    use pm_kind, only: RKG => RK ! all processor kinds are supported.
    use pm_io, only: display_type
    use pm_distGeom, only: setGeomLogPMF
 
    implicit none
 
    real(RKG) :: logPMF(3)
    type(display_type) :: disp
    disp = display_type(file = "main.out.F90")
 
    call disp%skip()
    call disp%show("call setGeomLogPMF(logPMF(1), 1_IK, logProbSuccess = log(.2_RKG))")
                    call setGeomLogPMF(logPMF(1), 1_IK, logProbSuccess = log(.2_RKG))
    call disp%show("logPMF(1)")
    call disp%show( logPMF(1) )
    call disp%skip()
 
    call disp%skip()
    call disp%show("call setGeomLogPMF(logPMF(1), 1_IK, logProbSuccess = log(.2_RKG))")
                    call setGeomLogPMF(logPMF(1), 1_IK, logProbSuccess = log(.2_RKG))
    call disp%show("logPMF(1)")
    call disp%show( logPMF(1) )
    call disp%skip()
 
    call disp%skip()
    call disp%show("call setGeomLogPMF(logPMF(1), 1_IK, logProbSuccess = log(.2_RKG))")
                    call setGeomLogPMF(logPMF(1), 1_IK, logProbSuccess = log(.2_RKG))
    call disp%show("logPMF(1)")
    call disp%show( logPMF(1) )
    call disp%skip()
 
    call disp%skip()
    call disp%show("call setGeomLogPMF(logPMF(1), 2_IK, logProbSuccess = log(.2_RKG))")
                    call setGeomLogPMF(logPMF(1), 2_IK, logProbSuccess = log(.2_RKG))
    call disp%show("logPMF(1)")
    call disp%show( logPMF(1) )
    call disp%skip()
 
    call disp%skip()
    call disp%show("call setGeomLogPMF(logPMF(1:3), [integer(IK) :: 1, 2, 3], logProbSuccess = log(.2_RKG), logProbFailure = log(1._RKG - .2_RKG))")
                    call setGeomLogPMF(logPMF(1:3), [integer(IK) :: 1, 2, 3], logProbSuccess = log(.2_RKG), logProbFailure = log(1._RKG - .2_RKG))
    call disp%show("logPMF(1:3)")
    call disp%show( logPMF(1:3) )
    call disp%skip()
 
    call disp%skip()
    call disp%show("call setGeomLogPMF(logPMF(1:3), [integer(IK) :: 1, 2, 3], logProbSuccess = log([0.1_RKG, .2_RKG, 1._RKG]))")
                    call setGeomLogPMF(logPMF(1:3), [integer(IK) :: 1, 2, 3], logProbSuccess = log([0.1_RKG, .2_RKG, 1._RKG]))
    call disp%show("logPMF(1:3)")
    call disp%show( logPMF(1:3) )
    call disp%skip()
 
    !%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
    ! Output an example array for visualization.
    !%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
 
    block
 
        use pm_arrayRange, only: getRange
        integer(IK), allocatable :: stepSuccess(:)
        real(RKG) :: logPMF(4)
        integer :: fileUnit, i
 
        stepSuccess = getRange(1_IK, 10_IK)
        open(newunit = fileUnit, file = "setGeomLogPMF.IK.txt")
        do i = 1, size(stepSuccess)
            call setGeomLogPMF(logPMF, stepSuccess(i), log([.1_RKG, .2_RKG, .5_RKG, .8_RKG]))
            write(fileUnit, "(*(g0,:,' '))") stepSuccess(i), exp(logPMF)
        end do
        close(fileUnit)
 
    end block
 
end program example

Example Unix compile command via Intel ifort compiler ⛓

#!/usr/bin/env sh
rm main.exe
ifort -fpp -standard-semantics -O3 -Wl,-rpath,../../../lib -I../../../inc main.F90 ../../../lib/libparamonte* -o main.exe
./main.exe

Example Windows Batch compile command via Intel ifort compiler ⛓

del main.exe
set PATH=..\..\..\lib;%PATH%
ifort /fpp /standard-semantics /O3 /I:..\..\..\include main.F90 ..\..\..\lib\libparamonte*.lib /exe:main.exe
main.exe

Example Unix / MinGW compile command via GNU gfortran compiler ⛓

#!/usr/bin/env sh
rm main.exe
gfortran -cpp -ffree-line-length-none -O3 -Wl,-rpath,../../../lib -I../../../inc main.F90 ../../../lib/libparamonte* -o main.exe
./main.exe

Example output ⛓

 
call setGeomLogPMF(logPMF(1), 1_IK, logProbSuccess = log(.2_RKG))
logPMF(1)
-1.6094379124341003
 
 
call setGeomLogPMF(logPMF(1), 1_IK, logProbSuccess = log(.2_RKG))
logPMF(1)
-1.6094379124341003
 
 
call setGeomLogPMF(logPMF(1), 1_IK, logProbSuccess = log(.2_RKG))
logPMF(1)
-1.6094379124341003
 
 
call setGeomLogPMF(logPMF(1), 2_IK, logProbSuccess = log(.2_RKG))
logPMF(1)
-1.8325814637483100
 
 
call setGeomLogPMF(logPMF(1:3), [integer(IK) :: 1, 2, 3], logProbSuccess = log(.2_RKG), logProbFailure = log(1._RKG - .2_RKG))
logPMF(1:3)
-1.6094379124341003, -1.8325814637483100, -2.0557250150625199
 
 
call setGeomLogPMF(logPMF(1:3), [integer(IK) :: 1, 2, 3], logProbSuccess = log([0.1_RKG, .2_RKG, 1._RKG]))
logPMF(1:3)
-2.3025850929940455, -1.8325814637483100, -0.17976931348623157E+309
 
 

Postprocessing of the example output ⛓

#!/usr/bin/env python
 
import matplotlib.pyplot as plt
import pandas as pd
import numpy as np
import glob
import sys
 
fontsize = 17
 
kind = "IK"
label = [ r"probSuccess = .1"
        , r"probSuccess = .2"
        , r"probSuccess = .5"
        , r"probSuccess = .8"
        ]
 
pattern = "*." + kind + ".txt"
fileList = glob.glob(pattern)
if len(fileList) == 1:
 
    df = pd.read_csv(fileList[0], delimiter = " ", header = None)
 
    fig = plt.figure(figsize = 1.25 * np.array([6.4, 4.8]), dpi = 200)
    ax = plt.subplot()
 
    for i in range(1,len(df.values[0,:]+1)):
 
            plt.plot( df.values[:, 0]
                    , df.values[:,i]
                    , marker = "."
                    )
 
    plt.xticks(fontsize = fontsize - 2)
    plt.yticks(fontsize = fontsize - 2)
    ax.set_xlim([0, None])
    ax.set_xlabel("stepSuccess", fontsize = fontsize)
    ax.set_ylabel("PMF", fontsize = fontsize)
 
    plt.grid(visible = True, which = "both", axis = "both", color = "0.85", linestyle = "-")
    ax.tick_params(axis = "y", which = "minor")
    ax.tick_params(axis = "x", which = "minor")
 
    ax.legend   ( label
                , fontsize = fontsize
               #, loc = "center left"
               #, bbox_to_anchor = (1, 0.5)
                )
 
    plt.savefig(fileList[0].replace(".txt",".png"))
 
else:
 
    sys.exit("Ambiguous file list exists.")

Visualization of the example output ⛓

Test:

test_pm_distGeom

Todo:

Normal Priority: This generic interface can be extended to complex arguments.

Final Remarks ⛓

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If you believe this algorithm or its documentation can be improved, we appreciate your contribution and help to edit this page's documentation and source file on GitHub.
For details on the naming abbreviations, see this page.
For details on the naming conventions, see this page.
This software is distributed under the MIT license with additional terms outlined below.

1. If you use any parts or concepts from this library to any extent, please acknowledge the usage by citing the relevant publications of the ParaMonte library.
   
2. If you regenerate any parts/ideas from this library in a programming environment other than those currently supported by this ParaMonte library (i.e., other than C, C++, Fortran, MATLAB, Python, R), please also ask the end users to cite this original ParaMonte library.
   

This software is available to the public under a highly permissive license.
Help us justify its continued development and maintenance by acknowledging its benefit to society, distributing it, and contributing to it.

Copyright

Computational Data Science Lab

Author:

Amir Shahmoradi, Oct 16, 2009, 11:14 AM, Michigan

Definition at line 336 of file pm_distGeom.F90.

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The documentation for this interface was generated from the following file:

• src/fortran/main/pm_distGeom.F90